BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C10LP1|AL427603
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1847 0.0
>3x_Contig1581
Length = 11429
Score = 1847 bits (928), Expect = 0.0
Identities = 949/958 (99%), Gaps = 1/958 (0%)
Strand = Plus / Minus
Query: 1 tgcactgtttgttcttcatatatcgdaaccaagcacattccaatggccaatacggtwcac 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1106 tgcactgtttgttcttcatatatcgagaccaagcacattccaatggccaatacggttcac 1047
Query: 61 aaaagcatcaaactagacgttgtatattaaacaatatttgctggtagtttttaatttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 aaaagcatcaaactagacgttgtatattaaacaatatttgctggtagtttttaatttatt 987
Query: 121 caagtctatacataaggtgagatgtagaatatatgtgccaaatcaattgacttgtataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 caagtctatacataaggtgagatgtagaatatatgtgccaaatcaattgacttgtataca 927
Query: 181 aaadatgtaggtgtgaaatgtgatcattaactgtcatttcctcccgtctatcttaagttc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aaaaatgtaggtgtgaaatgtgatcattaactgtcatttcctcccgtctatcttaagttc 867
Query: 241 tccggttatagtcaaatattcaaagggattgaatttcatatgcgatcattgaragtggta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 866 tccggttatagtcaaatattcaaagggattgaatttcatatgcgatcattgaaagtggta 807
Query: 301 catcatcagtgaggaaggttttgataaaagcctgctcagtgtaaaggtaagaggagggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 catcatcagtgaggaaggttttgataaaagcctgctcagtgtaaaggtaagaggagggaa 747
Query: 361 cacgaaaagtaaaatacaaactaggtaatggtaaatggtgcctctacgcaccgctctcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cacgaaaagtaaaatacaaactaggtaatggtaaatggtgcctctacgcaccgctctcct 687
Query: 421 caattcttgaaaatgcggatgacagctgtcatgaaaatggcggatagaactggaatagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 caattcttgaaaatgcggatgacagctgtcatgaaaatggcggatagaactggaatagtg 627
Query: 481 aagttatcatcccagttaaacaagtcgataccttcactcaaagctgcgacaaaaccacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagttatcatcccagttaaacaagtcgataccttcactcaaagctgcgacaaaaccacct 567
Query: 541 aatagcgaaagttgtagtaggtttagtttgcttgtctcttcggtccaggagatttcacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aatagcgaaagttgtagtaggtttagtttgcttgtctcttcggtccaggagatttcacct 507
Query: 601 ggtttgttcacccagttataatgaggcacaaagaatccgtaaaatgagtgacaagttatg 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 506 ggtttgttcacccagttataatgaggcacaaagaatccgtaaaatgagtaacaagttatg 447
Query: 661 agaccaacggaaaaggctgctatggaacctgctaaagacttatttctggccaattttggt 720
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agaccaacggaaaaggctgcaatggaacctgctaaagacttatttctggccaattttggt 387
Query: 721 gtaaggtgtccgtactttctaccgaaagtagacgcagcggtatctgaccaacttagtaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtaaggtgtccgtactttctaccgaaagtagacgcagcggtatctgaccaacttagtaag 327
Query: 781 aacagtgagattaacgcgatatctttactaaaaaaggagaacgcaaaagtcaggcccaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aacagtgagattaacgcgatatctttactaaaaaaggagaacgcaaaagtcaggcccaat 267
Query: 841 aagtaccataggactccattatacgtatgawtttcttttttcctcatcaatgccccaaca 900
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 266 aagtaccataggactccattatacgtatgaatttcttttttcctcatcaatgccccaaca 207
Query: 901 caacgacaatacattttattgaagaatggagaacgt-gacgaatgaagtctaaaataa 957
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 206 caacgacaatacattttattgaagaatggagaacgtagacgaatgaagtctaaaataa 149
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6186
Number of Sequences: 1807
Number of extensions: 6186
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)